Publications

24. Malepathirana, Tamasha, Damith Senanayake, Rajith Vidanaarachchi, Vini Gautam, and Saman Halgamuge. “Dimensionality reduction for visualizing high-dimensional biological data.” Biosystems 220 (2022): 104749.

23. Tran, Hao Nguyen, and Vini Gautam. “Micro-and nanodevices for integration with human brain organoids.” Biosensors and Bioelectronics (2022): 114734.

22. Raj, Vidur, Aswani Gopakumar, Gayatri Vaidya, John Scott, Milos Toth, Chennupati Jagadish, and Vini Gautam. “High-density individually addressable platinum nanoelectrodes for biomedical applications.” Discover Materials 2, no. 1 (2022): 6.

21. Malepathirana, Tamasha A., Damith Senanayake, Vini Gautam, Martin Engel, Rachelle Balez, Michael Lovelace, Gayathri Sundaram et al. “Visualization of Incrementally Learned Projection Trajectories for Longitudinal Data.” bioRxiv (2022): 2022-11.

20. Malepathirana, Tamasha, Damith A. Senanayake, Vini Gautam, and Saman K. Halgamuge. “Robustness of visualization methods in preserving the continuous and discrete latent structures of high-dimensional single-cell data.” In 2021 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), pp. 1-9. IEEE, 2021.

19. Raj, Vidur, Chennupati Jagadish, and Vini Gautam. “Understanding, engineering, and modulating the growth of neural networks: An interdisciplinary approach.” Biophysics Reviews 2, no. 2 (2021): 021303.

18. Wang, Yi, Kiara F. Bruggeman, Stephanie Franks, Vini Gautam, Stuart I. Hodgetts, Alan R. Harvey, Richard J. Williams, and David R. Nisbet. “Is viral vector gene delivery more effective using biomaterials?.” Advanced Healthcare Materials 10, no. 1 (2021): 2001238.

17. Lu, Xiaoyuan, Vini Gautam, Dmitry Shishmarev, and Vincent R. Daria. “Sensing refractive index gradients along dielectric nanopillar metasurfaces.” Optics Express 28, no. 21 (2020): 31594-31602.

16. Ooi, Lezanne, Mirella Dottori, Anthony L. Cook, Martin Engel, Vini Gautam, Alexandra Grubman, Damián Hernández et al. “If human brain organoids are the answer to understanding dementia, what are the questions?.” The Neuroscientist 26, no. 5-6 (2020): 438-454.

15. Hanlon, Liam, Vini Gautam, James DA Wood, Prithvi Reddy, Michael SJ Barson, Marika Niihori, Alexander RJ Silalahi et al. “Diamond nanopillar arrays for quantum microscopy of neuronal signals.” Neurophotonics 7, no. 3 (2020): 035002-035002.

14. Hu, Chao, Deepu Ashok, David R. Nisbet, and Vini Gautam. “Bioinspired surface modification of orthopedic implants for bone tissue engineering.” Biomaterials 219 (2019): 119366.

13. V. Gautam, S. Naureen, N. Shahid, Q. Gao, Y. Wang, D. Nisbet, C. Jagadish and V. Daria, Engineering highly interconnected neuronal networks on nanopillar arrays. Nano Lett (2017)

12. Y. Li, V. Gautam, A. Bruestle, A. Cockburn, V. Daria and W.M. Lee, Flexible polygon-mirror based laser scanning microscope platform for multiphoton in-vivo imaging. J. Biophotonics (2017)

11. M. L. G. Castanares, V. Gautam, H. A. Bachor, V. Daria, Efficient holographic multi-site two- photon fluorescence for functional calcium imaging of  neuronal circuits. Imaging and Appl. Optics DT4G.2 (2016)
Conference Paper

10. M.L.G Castanares, V. Gautam, J. Drury, H. Bachor and V. Daria, Efficient multi-site two-photon fluorescence for functional imaging of neuronal circuits. J. Biomed. Opt. Express 7, 5325-5334 (2016)

9. V. Gautam, J. Drury, J. M. C. Choy, C. Stricker, H. Bachor and V. Daria, Improved two-photon imaging of living neurons in a brain tissue through temporal gating. J. Biomed. Opt. Express 6, 4027- 4036 (2015).

8. V. Gautam and K. S. Narayan, Polymer optoelectronic structures for retinal prosthesis.
    Organogenesis, 10(1), 0-1 (2014). Link